This function Sparrow Regression wrapped with the Rmpi::mpi parralel implementation. User specifies between sparrowZ, sparrow2Z, or sparrow2ZFDR implementation.
Usage
mpiWrapper(
data,
nodes,
pathv,
regressionFunction,
outputpath,
eigen = NULL,
regulatorIndex = NULL,
hosts = NULL
)Arguments
- data
Required. Expression matrix to be used for network construction.
- nodes
Required. The number of nodes to run the process over.
- pathv
Required.
- regressionFunction
Required. Character vector specifying the specific sparrow regression function to deploy. Options are one of c("sparrowZ", "sparrow2Z", "sparrow2ZFDR")
- outputpath
Required. The output path to save the resulting coexpression network
- eigen
Optional. (Default = NULL)
- regulatorIndex
Optional. (Default = NULL)
- hosts
Optional. (Default = NULL)