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app_server()
|
App server |
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app_ui()
|
App UI |
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box_docs_color()
|
Get color for documentation infobox |
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box_meta_color()
|
Get color for metadata infobox |
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box_success_color()
|
Get color for success rate infobox |
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combine_all_metadata()
|
Combine all metadata |
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create_info_table()
|
Create a nice, printable version of the file info |
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edit_annotations_server()
|
Edit annotations module server |
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edit_annotations_ui()
|
Edit annotations module UI |
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filter_study_table_latest()
|
Get study table with most recent metadata files |
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format_date()
|
Format date |
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get_all_file_data()
|
Get data for all files in table |
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get_all_studies_table()
|
Get synapse fileview |
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get_data()
|
Get data from file |
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get_file_indices()
|
Get file indices by metadataType |
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get_file_indices_named()
|
Get named file indices by metadataType |
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get_file_indices_vector()
|
Get file indices by metadataType |
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get_info_box_ui()
|
Get info box UI |
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get_user_name()
|
Get the user name |
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num_doc_files()
|
Get the number of documentation files |
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num_individuals()
|
Get number of individuals |
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num_manifest_files()
|
Get number of files in manifest |
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num_meta_files()
|
Get the number of metadata files |
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num_specimens()
|
Get number of specimens |
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percent_pass_validation()
|
Percent of passing validation results |
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run_app()
|
Run the Shiny application |
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study_overview_server()
|
Server for the study overview module |
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study_overview_ui()
|
UI for the study overview module |
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validate_all_studies()
|
Validate all studies |
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validate_study()
|
Validate a study |