R/visualization-functions.R
conditional_plot_sexcheck.Rd
Work around to expose plot_sexcheck to testing and export but also leverage
targets function for skipping targets conditionally (see "targets::tar_cancel()"
).
conditional_plot_sexcheck(clean_metadata, count_df, biomart_results, sex_var)
A data frame with sample identifiers as rownames and variables as
factors or numeric as determined by "sageseqr::clean_covariates()"
.
A counts data frame with sample identifiers as column names and gene Ids are rownames.
Output of "sageseqr::get_biomart()"
. Gene Ids are
stored as rownames.
Column name of the sex or gender-specific metadata.