The plot colors genes where the adjusted p-value exceed the `p_value_threshold` and the `fold_change_threshold`. Optionally, provide a list of genes to label in the plot via `gene_list`.
plot_volcano(de, p_value_threshold, fold_change_threshold, gene_list)Differential expression results from
"sageseqr::differential_expression()" output object named
"differential_expression".
Numeric. P-values are adjusted by Benjamini and Hochberg (BH) false discovery rate (FDR). Significant genes are those with an adjusted p-value greater than this threshold.
Numeric. Significant genes are those with a fold-change greater than this threshold.
A vector of genes to label in the volcano plot.